Insertion junction: CLIP2.046610_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046610
Chromosome:chromosome 12
Location:1487685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488000 FFT4 putative fructan fructosyltransferase; (1 of 2) 2.4.1.99 - Sucrose:sucrose fructosyltransferase / Sucrose:sucrose 1-fructosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTTTCAGCGGTCCGGCGCGAGGGTCGCGTCACCGACAAAAGCGCAAGC
Internal bar code:ACATTAGCATTCCTTGCGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1732
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTTCCCGCGCAAGAATG
Suggested primer 2:CACAAGTCCGAACGACCAGA