Insertion junction: CLIP2.046617_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046617
Chromosome:chromosome 3
Location:6443709
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193250 (1 of 1) 2.7.1.160 - 2'-phosphotransferase / Yeast 2'-phosphotransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTGAGGCCACGGGTGGCGGAAGCTATTTGTGCACGGGGTAGAGCAGC
Internal bar code:GTCTTTCCATGGGCTAGTGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4925
LEAP-Seq percent confirming:88.3721
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAATTGGTAGAACGCTCG
Suggested primer 2:CACCTCGGCCCACTTGTTAT