Insertion junction: CLIP2.046624_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046624
Chromosome:chromosome 4
Location:1700751
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212300 PPP17 (1 of 1) PTHR13832:SF224 - PROTEIN PHOSPHATASE 2C 70; Phosphoprotein phosphatase 2C-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATAAACAGGCGCTGTTGGGAAACGGCGCGGCGTTGCACAGACCCCCGCT
Internal bar code:ATCAGTTCCACTCCCCTAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:820
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTACACGCCGGGGTATGTAG
Suggested primer 2:CACCATTCACGCACACACAG