Insertion junction: CLIP2.046638_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046638
Chromosome:chromosome 16
Location:993767
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648900 (1 of 2) PF02696 - Uncharacterized ACR, YdiU/UPF0061 family (UPF0061) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCCGGGCGTATGCATGCTGTCCTGCTCGTCATGAGGCGGAGGAGGAG
Internal bar code:AATACACGATGACCTCCCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2513
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTAATGTTCAGCAGGGG
Suggested primer 2:AGACTGGGCTAGAGAGGGTG