Insertion junction: CLIP2.046639_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046639
Chromosome:chromosome 3
Location:4582330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176450 (1 of 17) IPR029069 - HotDog domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTCCATACTCTGTCCTGGCAGGTGGCCTGACAGGTGGCCTGACAGGTG
Internal bar code:TATGGATTTGCGGGCGGTTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:239
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCCGCTGCAATGTTTTTA
Suggested primer 2:CAATGAGCTGCTGCGGATTC