Insertion junction: CLIP2.046639_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046639
Chromosome:chromosome 3
Location:4582348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176450 (1 of 17) IPR029069 - HotDog domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGTGCAGAGCGTGACCAGTTGGCAGGACCGGGCGTCAGATGCACCCG
Internal bar code:TTGTATCCGTAGGAACCAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:661
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAATGAGCTGCTGCGGATTC
Suggested primer 2:GGCCCGCTGCAATGTTTTTA