Insertion junction: CLIP2.046641_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046641
Chromosome:chromosome 2
Location:3524327
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099100 (1 of 3) K10587 - ubiquitin-protein ligase E3 A (UBE3A, E6AP); RCC-type HECT ubiquitin ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTATGATTCTCGCTTCGGGTGCGAGAGGTCACGGGTTCGATTCCCGTAA
Internal bar code:GATTGTTGCAGCATGTCTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3500
LEAP-Seq percent confirming:91.7526
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGGTGTCCACGGTTATG
Suggested primer 2:TGTGAAGCCTCAAGACGCAT