Insertion junction: CLIP2.046651_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046651
Chromosome:chromosome 3
Location:5218139
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00234913

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATCCAAACGTCAAGGCACTGTCTGAGAGCGCAACCCATACAAAGACT
Internal bar code:AGGATATTGAAAATGGTTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2026
LEAP-Seq percent confirming:95.9184
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGTCAAGACATTCCCCC
Suggested primer 2:GCCAATCAGTGCAGGTAGGT