Insertion junction: CLIP2.046664_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046664
Chromosome:chromosome 14
Location:2315627
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g622800 (1 of 1) IPR000104//IPR002921//IPR029058 - Antifreeze protein, type I // Fungal lipase-like domain // Alpha/Beta hydrolase fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACAAGCGTTGAGCTTATTGTGAGGCGCGCACTGTGAAGTAGATTTGCA
Internal bar code:TTCTTTATCGCCATGAAGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1888
LEAP-Seq percent confirming:84.7826
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTACCAGCAGCAGCCTTA
Suggested primer 2:CCAGTCATGGCGTCAGTCTT