Insertion junction: CLIP2.046679_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046679
Chromosome:chromosome 1
Location:5225158
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036600 EXN3 (1 of 2) K14570 - RNA exonuclease 1 (REX1, REXO1, RNH70); Exoribonuclease II CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGCAGAAGGAGGGGAAGAGCGAGAAGGAGGGAGAGAAGAAGGACAAG
Internal bar code:ATACCCTGATTCGCAAGTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2147
LEAP-Seq percent confirming:58.9286
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTCCCAAGTACCGCATT
Suggested primer 2:ACCTGGTGCGAAGAAGGATG