Insertion junction: CLIP2.046680_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046680
Chromosome:chromosome 3
Location:6476322
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193576 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCAATTATCACGGCATGCTGTGATCACTTGCGCCGGCGGCGTCGCGCT
Internal bar code:GCTGAACCTAAGCTTCCGTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:549
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATCCCTATCTCACCGTG
Suggested primer 2:GCAAACCTGACCCAGATGGA