Insertion junction: CLIP2.046685_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046685
Chromosome:chromosome 16
Location:2201820
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g658150 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGATGCAGTGCGGAGCGTGTTGCCCAGCTTCTGCTCCCCCCAGCTTCGT
Internal bar code:CGTTATATTAAGTTTTGTCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1292
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGGCCTTTTGCTTGAG
Suggested primer 2:GTGGCTGCAGAGACTAGCAA