Insertion junction: CLIP2.046689_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046689
Chromosome:chromosome 1
Location:5178170
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036150 (1 of 1) PTHR14095:SF0 - PROTEIN C06G1.5, ISOFORM B 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTTTGTGACTGCCCTACGCGGACGCACGCTTCCTTCCCCGAACCCAGA
Internal bar code:ACTCTCTATAGGCTAGACGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1593
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTGCTGTTGCCTGAAAG
Suggested primer 2:CGCTCAGACTTCCCTTGTGT