Insertion junction: CLIP2.046691_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046691
Chromosome:chromosome 16
Location:502045
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692902 AHI1 Abelson-helper integration site 1; (1 of 3) PTHR22847:SF361 - JOUBERIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGAGGAACTTCAACGCGTCGTTTCGGCCCTCCGCCACCGCCACCTCCA
Internal bar code:ACGGTTGTTCAATAGACGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:517
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTGGCGTCATTCATGTC
Suggested primer 2:GTGGGTGTAGGTGTGTGGAG