Insertion junction: CLIP2.046693_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046693
Chromosome:chromosome 16
Location:4561977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g671250 (1 of 3) K12041 - solute carrier family 9 (sodium/hydrogen exchanger), member 6/7 (SLC9A6_7, NHE6_7) 3'UTR_intron
Cre16.g671300 (1 of 3) K12041 - solute carrier family 9 (sodium/hydrogen exchanger), member 6/7 (SLC9A6_7, NHE6_7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGGCAGGCGGACAGACGTTCGCGACCGCGAATTAGCGCTGCCGGTCG
Internal bar code:TGATAACTTCGCAGCGTGCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:667
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GAACCTGGTGACGAGAGCAA
Suggested primer 2:AACATCGACGTCGTTCACCA