Insertion junction: CLIP2.046695_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046695
Chromosome:chromosome 16
Location:2409813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659750 CEP15 Cysteine endopeptidase; (1 of 3) 3.4.18.1 - Cathepsin X / Lysosomal carboxypeptidase B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCGTTTTCCCCTTTCACCGCCCCCAGAATTGTTCCCGTGCCTGTGTGG
Internal bar code:GTGAAGGTCAGCATTTTGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1759
LEAP-Seq percent confirming:82.1429
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCAGAGCAATGCGTCACA
Suggested primer 2:CAAGTGAGTTTTGGGGCGTG