Insertion junction: CLIP2.046715_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046715
Chromosome:chromosome 11
Location:3558064
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477900 protein of unknown function 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGGTCGCAGGAAGCATTTGGGCAGGCATATTGTGAACCGCCGCAAGCA
Internal bar code:GCTTGGAAACTCTTAGGTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2177
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTTCGCGCATCGTACTG
Suggested primer 2:CGCGTGCACGTTGAATAGAG