Insertion junction: CLIP2.046716_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046716
Chromosome:chromosome 12
Location:1986113
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g511000 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCCCGCAGGCTGTCGGCGCTGACGCCGTTGCCACCGGCAGGCCCTGCC
Internal bar code:TCAAGTATGTGCCGCTTCGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4964
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCGTCAAGCAGTGCAAAA
Suggested primer 2:GTCTATCTTGTCCCGCTCCG