Insertion junction: CLIP2.046721_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046721
Chromosome:chromosome 6
Location:2748102
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g271150 FAP74,C1d-HC3 (1 of 6) PF14874 - Flagellar-associated PapD-like (PapD-like); Flagellar Associated Protein 74 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGCTGAACGAGTGCTGCGACTCCCCGCTTACCGAAGCCCTACCGTAC
Internal bar code:ATCACTGCGCCTTTATGAGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:158
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACAAAGCGTCAATGGGT
Suggested primer 2:AGATTTGGCGATCATGGGCA