Insertion junction: CLIP2.046730_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046730
Chromosome:chromosome 12
Location:2009600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801373 (1 of 2) IPR000104//IPR000477//IPR005135 - Antifreeze protein, type I // Reverse transcriptase domain // Endonuclease/exonuclease/phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTTGTGGTCGCTGAAATGGGAGAATCATCATAAGGAAGCACTGTGGCG
Internal bar code:CTTCGATTTAGCATTGGCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4777
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAAGTCCAGGGCAGACAT
Suggested primer 2:ATGTGACTGCTGTGTGGAGG