Insertion junction: CLIP2.046740_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046740
Chromosome:chromosome 7
Location:5972978
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g354551 FAP65 (1 of 2) PTHR10270:SF161 - NUCLEAR CONTROL OF ATPASE PROTEIN 2; Flagellar Associated Protein 65 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCAGGCCTACCGTTGGCGGCCCCACCACAGTCTCCTCCATGCCCAGGC
Internal bar code:ACAAGGGGTCTAGCGTTACGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2530
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCACCAGTACATGACGA
Suggested primer 2:TGCTGCTGACGAGGAAGAAG