Insertion junction: CLIP2.046757_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046757
Chromosome:chromosome 1
Location:5300297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g037250 intron
lncRNA_TCONS_00007900 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTATAAGGGACCGCTTAGGCTGGGAACCGGCCATGCACAAGCGCCGGTT
Internal bar code:TTGGGTTAGTGCGACAGATTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3567
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGGTGACCTTCTCAACGC
Suggested primer 2:TGGTTGCGTGAATGTTGCAG