Insertion junction: CLIP2.046758_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046758
Chromosome:chromosome 1
Location:5176203
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036150 (1 of 1) PTHR14095:SF0 - PROTEIN C06G1.5, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCTGGCAGCGGCGGCGCCGCCTCCGGCGACGGGCCGCACTCGCCTCG
Internal bar code:TGTTGTTCCTCGAATAGACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1525
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAAGACGAGCACGGACTC
Suggested primer 2:GTGGGAGAGAGGACAACGTG