Insertion junction: CLIP2.046762_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046762
Chromosome:chromosome 12
Location:537718
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g494150 3'UTR
Cre12.g494200 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTCAAACTGACAAAACCAAACCAAAACAAATGCAAACACAAAACCGCA
Internal bar code:ACGCGGTTAGGAAGTGGCCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2757
LEAP-Seq percent confirming:98.1481
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTCAAGGGCTTTACGACC
Suggested primer 2:GGTGGGTTGGGTGTATGAGG