Insertion junction: CLIP2.046769_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046769
Chromosome:chromosome 6
Location:2013430
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265300 CSS2 Chlamydomonas specific family S protein; (1 of 7) IPR011048 - Cytochrome cd1-nitrite reductase-like, haem d1 domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGTAGGTGCCGCGGGGTTGAGTTGATCAGACACAGGCACGTGGCATC
Internal bar code:GCTGTAGCTTAATAGTGTGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1327
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTACACTGGCGCTTGTTTGC
Suggested primer 2:GAAGCCAAAAGGCAGGAAGC