Insertion junction: CLIP2.046772_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.046772
Chromosome:chromosome 3
Location:4558497
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176300 (1 of 1) IPR027420 - DNA polymerase beta, N-terminal domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCCGGGACCTGCCCGTCGCCAGCAGTCGCTGCGGCGTGCGGCCGCAC
Internal bar code:TTAGAGGGAGGGCCACAGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:940
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCGAACAGCTGAGACAT
Suggested primer 2:GCAGCTGCTTTCATACGCTC