Insertion junction: CLIP2.046775_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046775
Chromosome:chromosome 12
Location:8118467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552300 CTL3 (1 of 1) IPR001304//IPR016187//IPR024616 - C-type lectin // C-type lectin fold // Pherophorin; Putative pherophorin with C-type lectin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCTTCGCGGGTCCGCTAGCGGGCACGCAATTCCCCTTTGAACCGTGC
Internal bar code:AGTACCATTGACTTTATGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2181
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGGCTGTTATTTAACGCG
Suggested primer 2:ATGCGGCTGTAGGGTATTCG