Insertion junction: CLIP2.046778_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046778
Chromosome:chromosome 6
Location:4091331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278226 (1 of 6) PTHR31942//PTHR31942:SF1 - FAMILY NOT NAMED // MLO-LIKE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAAAACCCCCGCAGTTCACCAAGTTCTTCATCATCTTCCAGTTCCTGC
Internal bar code:GTTTCATTATAATGATTGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1930
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCCTCGCTCCAAAACAT
Suggested primer 2:ACGCACATTGTTGCCTTCAC