Insertion junction: CLIP2.046780_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046780
Chromosome:chromosome 1
Location:6048201
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g042700 (1 of 140) IPR002048 - EF-hand domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGCCATGTTTGGTCTCACGTGGGCGGTGGTGGCAGCGTTGAAGGACA
Internal bar code:GTCGTCGCGTTCAGACTGGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5430
LEAP-Seq percent confirming:81.6667
LEAP-Seq n confirming:98
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAATGTGCGGCTTGTTGA
Suggested primer 2:CTTTCAGGCTTCAACACGCC