Insertion junction: CLIP2.046796_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046796
Chromosome:chromosome 6
Location:2187848
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g266383 HEL26 (1 of 1) K18995 - ATP-dependent RNA helicase DHX29 [EC:3.6.4.13] (DHX29); DEAD/DEAH box helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCCGGCTCCGGCTTGGGCGGCGGCCGGCGGTGTGGCGGCGGCGGCGC
Internal bar code:CAACTAGGAACAGATGGGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:818
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTCAATCACTCCTTGCCT
Suggested primer 2:AGCAGGAAAGGCTCGTCATC