Insertion junction: CLIP2.046802_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046802
Chromosome:chromosome 12
Location:1663286
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486550 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype 3'UTR
Cre12.g486551 PFH19,PHX19 Putative prolyl 4-hydroxylase; (1 of 1) 1.14.11.7 - Procollagen-proline 3-dioxygenase / Prolyl 3-hydroxylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTGCAGACGGGATGTCCTCGCGCAATCCGCCTTTCTCGCCTCTCCGA
Internal bar code:CGTTGTACGTATGAGGTAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1888
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCCACATCTCGCAGAAC
Suggested primer 2:AAGAGACGCCACAGACAAGG