Insertion junction: CLIP2.046809_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.046809
Chromosome:chromosome 17
Location:5969392
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g742350 (1 of 71) IPR016181 - Acyl-CoA N-acyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTCCCGCCGCAGCCTCACACACACGGTGTGGCGGTGCTCGATCAGCA
Internal bar code:AGTAAATCATGAAACGCGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1187
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTCTCCGGCTCTTTGGT
Suggested primer 2:GTGTTGAATACGGGAGGCCA