Insertion junction: CLIP2.046829_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046829
Chromosome:chromosome 11
Location:4268931
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g482101 (1 of 2) IPR016024//IPR019399 - Armadillo-type fold // Parkin co-regulated protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGCTTGCATCTATATGTGTGCGGCGCTCGAAACCCAATGCTTTGCTG
Internal bar code:GCAATCAATATTGGGGCTCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:387
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTAAATCAGCAGGGCCG
Suggested primer 2:GCGCGTTGAAGTGAAAGTGT