Insertion junction: CLIP2.046834_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046834
Chromosome:chromosome 1
Location:3789392
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024750 STK (1 of 1) PF00059//PF00069//PF07714//PF14295 - Lectin C-type domain (Lectin_C) // Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) // PAN domain (PAN_4); Serine/threonine protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCAGGCCTGTCGGCACATCGTATCGTCGCTGACGTTGACGAACGGCAG
Internal bar code:AGTGCGGGTACGTCCATAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5262
LEAP-Seq percent confirming:83.5443
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCTGACTTGATGTGGCT
Suggested primer 2:CACGTACTCGGTACACACGT