Insertion junction: CLIP2.046838_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046838
Chromosome:chromosome 17
Location:3452687
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723600 IFT81,FLA9 Intraflagellar Transport Protein 81; (1 of 1) IPR029600 - Intraflagellar transport protein 81 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAAGAAGACCGCGTACGACAACGTGGTGGCCACGTTCGAGGCGCGCAC
Internal bar code:CGGCATTCGGGTTATCCGATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1017
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCGTCTCCCTTCGATGAG
Suggested primer 2:CTTCGAAGCGTGGCGTAATG