Insertion junction: CLIP2.046850_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046850
Chromosome:chromosome 3
Location:4318975
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174400 CDO1 Cysteine dioxygenase, regulated by copper nutrition; (1 of 2) 1.13.11.20 - Cysteine dioxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGGTGTCAGGTACGTACGCTGCACGCACCCAGCCAGCTCCCACGGCCA
Internal bar code:TGTAGAACAGTTAAAATTTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4538
LEAP-Seq percent confirming:91.4286
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTATCGAGCCCCTTCGTG
Suggested primer 2:GAAGGGAAGGGAAGGTCAGC