Insertion junction: CLIP2.046852_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046852
Chromosome:chromosome 1
Location:2622902
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015600 (1 of 1) PTHR23346//PTHR23346:SF7 - TRANSLATIONAL ACTIVATOR GCN1-RELATED // TRANSLATIONAL ACTIVATOR GCN1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTCACCGAGCTCTGGCGGATGCGCCAGTTGTCGGAGAACACGCCCTC
Internal bar code:ACACTATTAAGTATTCTCTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1312
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGCTTTGCGTATGATGG
Suggested primer 2:CATGTTGTCCAGCACCTCCT