Insertion junction: CLIP2.046853_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046853
Chromosome:chromosome 2
Location:4180133
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g104100 (1 of 1) PTHR10209//PTHR10209:SF216 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN // 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTTCATCCCTGAGAAGATCACGTGCGATGTGCGCCCACAAACGTGGCG
Internal bar code:TGTTAAAATGCGGTTAGGCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3846
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTTTAGAATTGCCGTCCG
Suggested primer 2:TGCACTGGCCTGTCTGTAAG