Insertion junction: CLIP2.046859_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046859
Chromosome:chromosome 5
Location:2303491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238250 BLZ2,BZIP1 (1 of 1) K04450 - cyclic AMP-dependent transcription factor ATF-2 (ATF2, CREBP1); Basic leucine zipper1 transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAAACAAAAACAAGCGATCACATGGGTTAGCGGTGGTTTGTGGGGGGA
Internal bar code:TAGCTTGGACGTATTTGTTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:933
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTTGAGTGTGACGCCTCC
Suggested primer 2:GCGTGAAGGTGACTGGTGTA