Insertion junction: CLIP2.046869_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046869
Chromosome:chromosome 13
Location:2495117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579850 (1 of 1) PTHR10984//PTHR10984:SF25 - ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN // ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACCGCGCCACGCACCGGACGAATGCACCCGCCGCAGCCGCCGCAGCC
Internal bar code:GAGTATTAAAGAGGAGGAGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1783
LEAP-Seq percent confirming:78.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGCCCAGCTCCATCTTC
Suggested primer 2:ATCCACAAGCTGTCCTTCGG