Insertion junction: CLIP2.046875_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046875
Chromosome:chromosome 10
Location:2088042
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g432950 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGAAGGCCCCGGCCGGCCAGCATGACGCGGCGACGGCGGGTCGCTGCC
Internal bar code:CCCGGGAAACCGATATGGCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:735
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCAAAGGCAGGCTATGT
Suggested primer 2:GAGCTTGAGGATCTCCGAGC