Insertion junction: CLIP2.046878_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046878
Chromosome:chromosome 12
Location:5266147
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801429 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGATCGGACGCCCCCACCGATTGTCTGTCCACGGGCACCAATTGCCAA
Internal bar code:TACGGACTTAGTCAGATTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1499
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGTATTTGCCGCTGGTA
Suggested primer 2:ACGACGTACACCAGCATTGT