Insertion junction: CLIP2.046882_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046882
Chromosome:chromosome 3
Location:3754236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169300 (1 of 2) K05681 - ATP-binding cassette, subfamily G (WHITE), member 2 (ABCG2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATACTTCACACCATGACGGTGCGGGAGGCTCTGGAGTTCGCGGCCGCA
Internal bar code:GTTATTCGTTAGGTTCATACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1096
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCTGTCGCTAAGTGGTT
Suggested primer 2:CCCTGTGACTGTTCGAAGCT