Insertion junction: CLIP2.046882_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046882
Chromosome:chromosome 3
Location:3754239
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169300 (1 of 2) K05681 - ATP-binding cassette, subfamily G (WHITE), member 2 (ABCG2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTGCAACACCGTTTCGGCGGGCCACCAGGATGCGGGGCATTCAGACG
Internal bar code:GGCCGTTCCTTGCTGCCATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5180
LEAP-Seq percent confirming:84.2975
LEAP-Seq n confirming:102
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:121

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGTGACTGTTCGAAGCT
Suggested primer 2:CGTCCTGTCGCTAAGTGGTT