Insertion junction: CLIP2.046887_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046887
Chromosome:chromosome 17
Location:2488973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715500 (1 of 1) PTHR10681//PTHR10681:SF91 - THIOREDOXIN PEROXIDASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGAAGTAGTTGTTGGAGCTGGCTTGCCGATCACGGCTTGCGGATTCAC
Internal bar code:TGTATTATGCAAACAATATTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:90
LEAP-Seq percent confirming:1.92308
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GGACAGCATTTGGACCGGTA
Suggested primer 2:GCGCCATTGGAGATACCGTA