Insertion junction: CLIP2.046896_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046896
Chromosome:chromosome 3
Location:8221841
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200200 (1 of 18) K08824 - cyclin-dependent kinase-like [EC:2.7.11.22] (CDKL) CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAATCAGCACCCAGCATTGACAATTTTGAGATGCCGCTTGCAATAACCT
Internal bar code:TGTGTCAAAATAATCGTTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:225
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCGTCACACGCGTTAGTT
Suggested primer 2:TGATGCTGGTGGTGCTACAG