Insertion junction: CLIP2.046898_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046898
Chromosome:chromosome 12
Location:3927332
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g515400 (1 of 17) PF08016 - Polycystin cation channel (PKD_channel) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGGCGGGCGGTGGCAGTGGGGCAGCGCGGTCGGGAGTTGGGGGAAGT
Internal bar code:CAATTGTAGGATTTAGCGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4567
LEAP-Seq percent confirming:62.7907
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCCTCTCACACAGGTAC
Suggested primer 2:GTGTTTGCTTCCCTGCCTTG