Insertion junction: CLIP2.046907_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046907
Chromosome:chromosome 6
Location:8441221
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g308400 PTN1 (1 of 1) 3.1.3.16//3.1.3.48//3.1.3.67 - Protein-serine/threonine phosphatase / Serine/threonine specific protein phosphatase // Protein-tyrosine-phosphatase / PTPase // Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase / Phosphatidylinositol-3,4,5-trisphosphate 3-phosphohydrolase; PTEN PI-3 phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATGAGTTCCGGCGCGCTGGCATTGCTACTGCTGCTGGGGTGGCTCAT
Internal bar code:AATCACCTACACATGTCATTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1332
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGACGGTGCAGGTATGTG
Suggested primer 2:CCTTTGCCAGTTTGTCCAGC