Insertion junction: CLIP2.046912_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046912
Chromosome:chromosome 6
Location:5412301
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285600 MID,RWP5 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGAGTGGATGGGCGACGAGGGCCCGCTGGTCGCAGTGGCGCTGCTGG
Internal bar code:CTTGTGCGTTCACTCGGTCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1872
LEAP-Seq percent confirming:32.5
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTCGTAGTACTGCGGAG
Suggested primer 2:ATGTTCCTCGAGCAACAGCA