Insertion junction: CLIP2.046925_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046925
Chromosome:chromosome 3
Location:2289766
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157751 (1 of 1) IPR011047//IPR018391//IPR027295 - Quinonprotein alcohol dehydrogenase-like superfamily // Pyrrolo-quinoline quinone beta-propeller repeat // Quinonprotein alcohol dehydrogenase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGGCGCGTGCGGCGGTGCACGCGGACGGTGCATCATGTTGGAACGCA
Internal bar code:GGTCGGCGGGACAGACATAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5576
LEAP-Seq percent confirming:34.1772
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCGACGGTTCAATCTTGA
Suggested primer 2:CAAGCGCACGACATCATGAG